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  • stcox: convergence issues using profile likelihood (-pllf- from SSC)

    * Re-post with more informative subject line.

    Hi Statalisters,

    I am trying to extract useful information from 'infinite' coefficients/CIs as suggested here using profile likelihoods and -pllf- from SSC:

    http://www.ctspedia.org/do/view/CTSp...initeEstimates

    However, I am having (not totally surprising) convergence issues; any ideas or suggestions?

    thanks-

    Andrew Lover



    Code:
    ****** start example
    
    // ssc install pllf
    use "http://www.stata-press.com/data/r11/repair", clear
    
    logistic foreign ib3.repair   // complete separation
    
    * generate some survival times
    set seed 12345
    gen time = 20*runiform(),, if foreign == 0
    replace time = 5*runiform(),,  if foreign != 0
    tabstat time, by(foreign)
    
    * need explicit dummies for -pllf-
    tab repair, gen(rep_dum)
    
    * general Cox model
    stset time, fail(foreign)
    stcox rep_dum*
    
    * Profile likelihood
    
    pllf stcox rep_dum*, profile(rep_dum1) diff trace // fails to converge
    
    pllf stcox rep_dum*, profile(rep_dum1) /// // not convincing
        diff range (-1000 50) trace
        
    ****** end example
    __________________________________________________ __
    Assistant Professor, Department of Biostatistics and Epidemiology
    School of Public Health and Health Sciences
    University of Massachusetts- Amherst
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