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  • Alpha level in Bonferroni Multiple Comparisons test

    Hi
    I would like to know the alpha level that Stata uses when doing a Bonferroni multiple comparisons test. Does it use 0.05 by default?
    thanks
    Ansuyah
    Last edited by Ansuyah Magan; 06 May 2017, 05:45.

  • #2
    Welcome to the Stata Forum / Statalist

    According to the Stata Manual,

    The Bonferroni adjustment (see Miller [1981]; also see van Belle et al. [2004, 534 – 537]) does
    this by (falsely but approximately) asserting that the critical level we should use, a, is the true critical level, α, divided by the number of tests, n; that is, a = α/n. For instance, if we are going to perform six tests, each at the 0.05 significance level, we want to adopt a critical level of 0.05/6 ≈ 0.00833.
    Hopefully that helps.
    Best regards,

    Marcos

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    • #3
      Ansuyah:
      welcome to the list.
      As an aside to Marcos' helpful advice please note that, in case of 6 multiple comparisons the statistical significance is at 0.05 (even if the revised critical level is 0.05/6≈ 0.00833).
      Put differently, you cannot report that one or more multipe comparisons are statistically significant at 0.00833 level.
      For some concerns about Bonferroni's adjustment, please take a look at: https://www.ncbi.nlm.nih.gov/pubmed/9553006.
      Kind regards,
      Carlo
      (Stata 19.0)

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      • #4
        Thank you Marcos and Carlo for your explanations. The Pubmed link was particularly useful.

        Kind regards
        Ansuyah

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